Laboratory for Genome Research

Department of Biomolecular Medicine, Ghent University
Center for Medical Genetics, Ghent University Hospital

Advancing genomic research for rare disorders through innovative technologies
State-of-the-art laboratory focused on solving genetic rare disorders using innovative genomic technologies

About

At the Laboratory for Genome Research, we focus on solving genetic rare disorders through the integration of cutting-edge genomic technologies. Our interdisciplinary team combines clinical expertise with advanced sequencing methods to improve a rapid diagnosis and management of genetic conditions.

Charge syndrome

Research Topics

Accelerating Diagnosis for Rare Pediatric Disorders: Integrating Cutting-Edge Omics Technologies

Focus on intellectual disability and congenital anomalies using advanced sequencing technologies.

  • Whole genome sequencing by Illumina short read sequencing (NovaseqX)
  • Implementation of latest analysis tools
  • Transcriptome data integration
  • Whole genome direct sequencing with Revio (PacBio) and/or Promethion (ONT)
    • Structural variant detection
    • Triplet Repeat Expansions
    • Dark Regions of the Genome
    • Epigenomics
  • Optical Genome Mapping (Bionano)
  • Functional Elucidation of Variants of Unknown Significance

Non Invasive Prenatal Testing for Genetic Aberrations and Pregnancy Complications

Collaboration with Woman's Clinic for comprehensive prenatal genetic analysis.

  • NIPT analysis and development
  • EXPECT+ program for the early detection of Pregnancy Complications

Research on Embryonic Development

Investigation of genomic aberrations and safety studies in embryo research.

  • Detection of genomic and genetic aberrations in human embryos
  • Influence of embryonic (mosaic) aneuploidy on implementation and development
  • Safety of nuclear transfer for mitochondrial disorders or infertility
  • CRISPR/Cas9 correction studies
  • in collaboration with G-FaST of prof. Björn Heindryckx

Cancer Research

Early detection and therapeutic advancement studies in cancer research.

  • Early noninvasive detection of cancer by Liquid Biopsies (LQB)
  • Patient stratification through noninvasive sampling
  • Development of novel therapeutic approaches by neo-epitope prediction
  • In close collaboration with prof. Jo Van Dorpe, prof. Karim Vermaelen, and prof. Bart Vandekerckhove

Our Team

PhD Students

Griet De Clercq

Ir. Griet De Clercq

Long Read Sequencing

Lisa De Witte

Lisa De Witte

Preimplantation Genetic Testing

Maria del Rocio Pérez Baca

Maria del Rocio Pérez Baca

Functional Genomics

Bram Van Gaever

Bram Van Gaever

Early detection and stratification in cancer research

Bram Van Gaever

Thomas Michiels

Neo-epitope prediction

Winter Vandenberghe

Winter Vandenberghe

Haploidization from Somatic Cells

Simon Jooris

Simon Jooris

Crispr/Cas9 Genome Editing

Roxana Jalali

Roxana Jalali

Nuclear Transfer for Infertility and Mitochondrial Disorders

Hongbei Mu

Hongbei Mu

Nuclear Transfer for Infertility and Mitochondrial Disorders

Shirin Abou Shady

Shirin Abou Shady

Long Read Sequencing

Beatrice Corzani

Beatrice Corzani

Long Read Sequencing

Lies Vantomme

Lies Vantomme

Lab Technician

Affiliated Postdoc

Dr. Malaïka Vanderlinden

Dr. Malaïka Vanderlinden

Cancer Research Specialist

Affiliated Scientific Staff (UZGent)

Annelies Dheedene

Dr. Annelies Dheedene

Lab Supervisor

Sarah Delbaere

Dr. Sarah Delbaere

Adjunct Lab Supervisor

Shana Verschuere

Dr. Shana Verschuere

Adjunct Lab Supervisor

Machteld Baetens

Ing. Machteld Baetens

Adjunct Lab Supervisor

Erika D'haenens

Erika D'haenens

Adjunct Lab Supervisor

Evelien Pouillie

Evelien Pouillie

Adjunct Lab Supervisor

Nele Dhont

Nele Dhont

Adjunct Lab Supervisor

Master students

Aron Vanhaeverbeke

Biomedical Sciences

Michelle Dejaegher

Biomedical Sciences

Jana De Busser

Biomedical Sciences

Evelien De Loof

Biomedical Sciences

Hannah Demedts

Biochemistry and Biotechnology

Helena Faveere

Bioscience Engineering

Anouk Batens

Biomedical Sciences

Chloë Vlamynck

Biomedical Sciences

Anne Ossieur

Biomedical Sciences

Vacancies

Adjunct Lab Supervisor

We are looking for a motivated and strongly engaged adjunct lab supervisor to strengthen our team.

Alumni

Prof. dr. ir. Sarah Vergult

Professor at Ghent University

Prof. dr. Arnaud Vanlander

Professor at Ghent University

Prof. dr. Mina Popovic

Guest Professor at Ghent University

Dr. Tom Sante

Scientific Collaborator

Dr. ir. Karen Buysse

Former PhD student

Dr. ir. Eva D'haene

Postdoctoral Researcher

Dr. Eva Jacobs

Former PhD student

Dr. ir. Lennart Raman

Former PhD Student

Dr. Bieke Bekaert

Postdoctoral Researcher

ir. Laurenz De Cock

Former PhD Student

Key Publications

Pronuclear transfer rescues poor embryo development of in vitro-grown secondary mouse follicles

Christodoulaki A, He H, Zhou M, De Roo C, Baetens M, De Pretre T, Fakhar-I-Adil M, Menten B, Van Soom A, Stoop D, et al. Hum Reprod Open. 2024

PubMed ID: 38286232

CRISPR/Cas gene editing in the human germline

Bekaert B, Boel A, et al. Semin Cell Dev Biol. 2022

PubMed ID: 35305903

Contact Us

Laboratory for Genome Research

Center for Medical Genetics Ghent (CMGG)
Medical Research Building 1 (entrance 34)
Ghent University Hospital
Corneel Heymanslaan 10
9000 Ghent, Belgium

bjorn.menten@ugent.be

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